Pseudomonas mendocina NK-01, MDS_1883

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1883
Name
Replicon chromosome
Genomic location 2065489 - 2066160 (+ strand)

Cross-References

RefSeq YP_004379666.1
GI 330502797
Entrez 10456665
INSDC AEB57914.1
NCBI Locus Tag MDS_1883
UniParc UPI000206E540
UniProtKB Acc F4DMT2
UniProtKB ID F4DMT2_PSEMN
UniRef100 UniRef100_F4DMT2
UniRef50 UniRef50_B2FMB3
UniRef90 UniRef90_F4DMT2

Product

Feature Type CDS
Coding Frame 1
Product Name
heme exporter protein CcmB
Synonyms
Evidence for Translation
Charge (pH 7) 0.67
Kyte-Doolittle Hydrophobicity Value 1.230
Molecular Weight (kDa) 23.3
Isoelectric Point (pI) 7.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 180 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001391 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1883

Human Homologs

References

No references are associated with this feature.