Pseudomonas mendocina NK-01, MDS_1898

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1898
Name
Replicon chromosome
Genomic location 2076506 - 2077477 (+ strand)

Cross-References

RefSeq YP_004379680.1
GI 330502811
Entrez 10456679
INSDC AEB57929.1
NCBI Locus Tag MDS_1898
UniParc UPI000206E54E
UniProtKB Acc F4DMU6
UniProtKB ID F4DMU6_PSEMN
UniRef100 UniRef100_F4DMU6
UniRef50 UniRef50_B2FIK3
UniRef90 UniRef90_F4DMU6

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.02
Kyte-Doolittle Hydrophobicity Value 0.372
Molecular Weight (kDa) 36311.2
Isoelectric Point (pI) 7.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 166 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000680 (651 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1898

Human Homologs

References

No references are associated with this feature.