Pseudomonas mendocina NK-01, MDS_2527

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2527
Name
Replicon chromosome
Genomic location 2774525 - 2775388 (- strand)

Cross-References

RefSeq YP_004380310.1
GI 330503441
Entrez 10457309
INSDC AEB58558.1
NCBI Locus Tag MDS_2527
UniParc UPI000206DA92
UniProtKB Acc F4DUT9
UniProtKB ID F4DUT9_PSEMN
UniRef100 UniRef100_F4DUT9
UniRef50 UniRef50_A4XUD0
UniRef90 UniRef90_F4DUT9

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.22
Kyte-Doolittle Hydrophobicity Value 0.080
Molecular Weight (kDa) 31.7
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 296 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG014711 (208 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2527

Human Homologs

References

No references are associated with this feature.