Pseudomonas mendocina NK-01, MDS_2628

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2628
Name
Replicon chromosome
Genomic location 2877584 - 2878564 (- strand)

Cross-References

RefSeq YP_004380411.1
GI 330503542
Entrez 10457410
NCBI Locus Tag MDS_2628

Product

Feature Type CDS
Coding Frame 1
Product Name
OmpF family protein
Synonyms
Evidence for Translation
Charge (pH 7) -12.55
Kyte-Doolittle Hydrophobicity Value -0.417
Molecular Weight (kDa) 34.8
Isoelectric Point (pI) 4.65

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 432 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003618 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2628

Human Homologs

References

No references are associated with this feature.