Pseudomonas mendocina NK-01, MDS_2991

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_2991
Name
Replicon	chromosome
Genomic location	3300139 - 3301512 (+ strand)

Cross-References

RefSeq	YP_004380774.1
GI	330503905
Entrez	10457773
INSDC	AEB59022.1
NCBI Locus Tag	MDS_2991
UniParc	UPI000206D8DA
UniProtKB Acc	F4E082
UniProtKB ID	F4E082_PSEMN
UniRef100	UniRef100_F4E082
UniRef50	UniRef50_Q9I3Y3
UniRef90	UniRef90_W6QYK7

Product

Feature Type	CDS
Coding Frame	1
Product Name	MATE efflux family protein
Synonyms
Evidence for Translation
Charge (pH 7)	16.00
Kyte-Doolittle Hydrophobicity Value	0.800
Molecular Weight (kDa)	48392.0
Isoelectric Point (pI)	10.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 461 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001295 (965 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_2991 Search term: MATE efflux family protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000378951 solute carrier family 47 member 1 [Source:HGNC Symbol;Acc:HGNC:25588] E-value: 8.4e-30 Percent Identity: 25.9
Ensembl 110, assembly GRCh38.p14	ENSP00000270570 solute carrier family 47 member 1 [Source:HGNC Symbol;Acc:HGNC:25588] E-value: 8.4e-30 Percent Identity: 25.9

References