Pseudomonas mendocina NK-01, MDS_3061

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3061
Name
Replicon chromosome
Genomic location 3385567 - 3386124 (+ strand)

Cross-References

RefSeq YP_004380844.1
GI 330503975
Entrez 10457843
INSDC AEB59092.1
NCBI Locus Tag MDS_3061
UniParc UPI000206DAB5
UniProtKB Acc F4DL94
UniProtKB ID F4DL94_PSEMN
UniRef100 UniRef100_F4DL94
UniRef50 UniRef50_W6R1F8
UniRef90 UniRef90_F4DL94

Product

Feature Type CDS
Coding Frame 1
Product Name
beta-lactamase domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.82
Kyte-Doolittle Hydrophobicity Value -0.309
Molecular Weight (kDa) 21015.6
Isoelectric Point (pI) 6.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 41 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001336 (343 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3061

Human Homologs

Ensembl 110, assembly GRCh38.p14
metallo-beta-lactamase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33711]
E-value: 1.2e-22
Percent Identity: 37.0

References

No references are associated with this feature.