Pseudomonas mendocina NK-01, MDS_3128

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3128
Name
Replicon chromosome
Genomic location 3450447 - 3451352 (- strand)

Cross-References

RefSeq YP_004380911.1
GI 330504042
Entrez 10457910
INSDC AEB59159.1
NCBI Locus Tag MDS_3128
UniParc UPI000206DCAA
UniProtKB Acc F4DM37
UniProtKB ID F4DM37_PSEMN
UniRef100 UniRef100_F4DM37
UniRef50 UniRef50_Q1LQF9
UniRef90 UniRef90_A4XT31

Product

Feature Type CDS
Coding Frame 1
Product Name
cysteine synthase B
Synonyms
Evidence for Translation
Charge (pH 7) -7.12
Kyte-Doolittle Hydrophobicity Value -0.267
Molecular Weight (kDa) 32.5
Isoelectric Point (pI) 4.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 633 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000898 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3128

Human Homologs

Ensembl 110, assembly GRCh38.p14
cystathionine beta-synthase [Source:HGNC Symbol;Acc:HGNC:1550]
E-value: 1.5e-43
Percent Identity: 37.0
Ensembl 110, assembly GRCh38.p14
cystathionine beta-synthase [Source:HGNC Symbol;Acc:HGNC:1550]
E-value: 1.5e-43
Percent Identity: 37.0
Ensembl 110, assembly GRCh38.p14
cystathionine beta-synthase [Source:HGNC Symbol;Acc:HGNC:1550]
E-value: 1.5e-43
Percent Identity: 37.0
Ensembl 110, assembly GRCh38.p14
cystathionine beta-synthase [Source:HGNC Symbol;Acc:HGNC:1550]
E-value: 1.5e-43
Percent Identity: 37.0

References

No references are associated with this feature.