Pseudomonas mendocina NK-01, MDS_3192

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3192
Name
Replicon chromosome
Genomic location 3527281 - 3528159 (- strand)

Cross-References

RefSeq YP_004380975.1
GI 330504106
Entrez 10457974
INSDC AEB59223.1
NCBI Locus Tag MDS_3192
UniParc UPI000206DE91
UniProtKB Acc F4DMZ0
UniProtKB ID F4DMZ0_PSEMN
UniRef100 UniRef100_F4DMZ0
UniRef50 UniRef50_Q9JZR4
UniRef90 UniRef90_A4XSW1

Product

Feature Type CDS
Coding Frame 1
Product Name
dihydrodipicolinate synthase
Synonyms
Evidence for Translation
Charge (pH 7) -5.44
Kyte-Doolittle Hydrophobicity Value 0.098
Molecular Weight (kDa) 31.4
Isoelectric Point (pI) 5.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 633 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000973 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3192

Human Homologs

Ensembl 110, assembly GRCh38.p14
4-hydroxy-2-oxoglutarate aldolase 1 [Source:HGNC Symbol;Acc:HGNC:25155]
E-value: 9.5e-27
Percent Identity: 31.0

References

No references are associated with this feature.