Pseudomonas mendocina NK-01, MDS_3257

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3257
Name
Replicon chromosome
Genomic location 3608040 - 3608300 (+ strand)

Cross-References

RefSeq YP_004381040.1
GI 330504171
Entrez 10458039
INSDC AEB59288.1
NCBI Locus Tag MDS_3257
UniParc UPI000206E06E
UniProtKB Acc F4DNU2
UniProtKB ID F4DNU2_PSEMN
UniRef100 UniRef100_F4DNU2
UniRef50 UniRef50_G8Q492
UniRef90 UniRef90_A4XWL9

Product

Feature Type CDS
Coding Frame 1
Product Name
NapD family protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.57
Kyte-Doolittle Hydrophobicity Value 0.095
Molecular Weight (kDa) 9539.9
Isoelectric Point (pI) 5.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 52 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001133 (345 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3257

Human Homologs

References

No references are associated with this feature.