Pseudomonas mendocina NK-01, MDS_3276

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3276
Name
Replicon chromosome
Genomic location 3624348 - 3625064 (+ strand)

Cross-References

RefSeq YP_004381059.1
GI 330504190
Entrez 10458058
INSDC AEB59307.1
NCBI Locus Tag MDS_3276
UniParc UPI000206E081
UniProtKB Acc F4DNW1
UniProtKB ID F4DNW1_PSEMN
UniRef100 UniRef100_F4DNW1
UniRef50 UniRef50_Q4ZQ49
UniRef90 UniRef90_A4XWN7

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.27
Kyte-Doolittle Hydrophobicity Value -0.427
Molecular Weight (kDa) 26.8
Isoelectric Point (pI) 6.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 42 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000909 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3276

Human Homologs

References

No references are associated with this feature.