Pseudomonas mendocina NK-01, MDS_3421

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_3421
Name
Replicon	chromosome
Genomic location	3783300 - 3784013 (- strand)

Cross-References

RefSeq	YP_004381204.1
GI	330504335
Entrez	10458203
INSDC	AEB59452.1
NCBI Locus Tag	MDS_3421
UniParc	UPI000206E404
UniProtKB Acc	F4DQM5
UniProtKB ID	F4DQM5_PSEMN
UniRef100	UniRef100_F4DQM5
UniRef50	UniRef50_Q9X2N2
UniRef90	UniRef90_F4DQM5

Product

Feature Type	CDS
Coding Frame	1
Product Name	6-phosphogluconolactonase
Synonyms
Evidence for Translation
Charge (pH 7)	-4.65
Kyte-Doolittle Hydrophobicity Value	0.146
Molecular Weight (kDa)	25289.8
Isoelectric Point (pI)	5.58

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 297 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002434 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_3421 Search term: 6-phosphogluconolactonase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000366620 hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4795] E-value: 5.2e-15 Percent Identity: 30.3
Ensembl 110, assembly GRCh38.p14	ENSP00000473348 hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4795] E-value: 5.2e-15 Percent Identity: 30.3

References