Pseudomonas mendocina NK-01, MDS_3481

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3481
Name
Replicon chromosome
Genomic location 3845150 - 3845965 (- strand)

Cross-References

RefSeq YP_004381264.1
GI 330504395
Entrez 10459797
INSDC AEB59512.1
NCBI Locus Tag MDS_3481
UniParc UPI000206E5A8
UniProtKB Acc F4DRH2
UniProtKB ID F4DRH2_PSEMN
UniRef100 UniRef100_F4DRH2
UniRef50 UniRef50_C7XAN2
UniRef90 UniRef90_A4XX74

Product

Feature Type CDS
Coding Frame 1
Product Name
GntR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.66
Kyte-Doolittle Hydrophobicity Value -0.287
Molecular Weight (kDa) 30757.2
Isoelectric Point (pI) 7.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 150 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001076 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3481

Human Homologs

References

No references are associated with this feature.