Pseudomonas mendocina NK-01, MDS_4001

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4001
Name
Replicon chromosome
Genomic location 4407918 - 4409264 (- strand)

Cross-References

RefSeq YP_004381784.1
GI 330504915
Entrez 10458783
INSDC AEB60032.1
NCBI Locus Tag MDS_4001
UniParc UPI000206E503
UniProtKB Acc F4DWT0
UniProtKB ID F4DWT0_PSEMN
UniRef100 UniRef100_F4DWT0
UniRef50 UniRef50_Q9I700
UniRef90 UniRef90_A4XYM7

Product

Feature Type CDS
Coding Frame 1
Product Name
beta alanine--pyruvate transaminase
Synonyms
Evidence for Translation
Charge (pH 7) -0.78
Kyte-Doolittle Hydrophobicity Value -0.064
Molecular Weight (kDa) 48488.2
Isoelectric Point (pI) 6.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 639 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000130 (850 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4001

Human Homologs

Ensembl 110, assembly GRCh38.p14
alanine--glyoxylate aminotransferase 2 [Source:HGNC Symbol;Acc:HGNC:14412]
E-value: 5.9e-28
Percent Identity: 29.3

References

No references are associated with this feature.