Pseudomonas mendocina NK-01, MDS_4158

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4158
Name
Replicon chromosome
Genomic location 4566751 - 4568103 (- strand)

Cross-References

RefSeq YP_004381941.1
GI 330505072
Entrez 10458940
INSDC AEB60189.1
NCBI Locus Tag MDS_4158
UniParc UPI000206DB07
UniProtKB Acc F4DYL1
UniProtKB ID F4DYL1_PSEMN
UniRef100 UniRef100_F4DYL1
UniRef50 UniRef50_P32427
UniRef90 UniRef90_A0A028VEE3

Product

Feature Type CDS
Coding Frame 1
Product Name
3-carboxy-cis,cis-muconate cycloisomerase
Synonyms
Evidence for Translation
Charge (pH 7) -5.28
Kyte-Doolittle Hydrophobicity Value 0.083
Molecular Weight (kDa) 47781.3
Isoelectric Point (pI) 6.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000229 (504 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4158

Human Homologs

References

No references are associated with this feature.