Pseudomonas mendocina NK-01, MDS_4312

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4312
Name
Replicon chromosome
Genomic location 4721900 - 4723264 (+ strand)

Cross-References

RefSeq YP_004382095.1
GI 330505226
Entrez 10459094
INSDC AEB60343.1
NCBI Locus Tag MDS_4312
UniParc UPI000206DEE2
UniProtKB Acc F4DLG1
UniProtKB ID F4DLG1_PSEMN
UniRef100 UniRef100_F4DLG1
UniRef50 UniRef50_A0A0B7DGZ2
UniRef90 UniRef90_W6QZN8

Product

Feature Type CDS
Coding Frame 1
Product Name
peptidase M23B
Synonyms
Evidence for Translation
Charge (pH 7) 2.90
Kyte-Doolittle Hydrophobicity Value -0.427
Molecular Weight (kDa) 49798.8
Isoelectric Point (pI) 8.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 529 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000646 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4312
Search term: peptidase M23B

Human Homologs

References

No references are associated with this feature.