Pseudomonas mendocina NK-01, MDS_4341

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4341
Name
Replicon chromosome
Genomic location 4751307 - 4752404 (- strand)

Cross-References

RefSeq YP_004382124.1
GI 330505255
Entrez 10459123
NCBI Locus Tag MDS_4341

Product

Feature Type CDS
Coding Frame 1
Product Name
spermidine/putrescine ABC transporter ATPase
Synonyms
Evidence for Translation
Charge (pH 7) -2.43
Kyte-Doolittle Hydrophobicity Value -0.155
Molecular Weight (kDa) 40.4
Isoelectric Point (pI) 6.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000586 (511 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4341

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 1.0e-22
Percent Identity: 32.5
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 1.0e-22
Percent Identity: 32.5
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 1.0e-22
Percent Identity: 32.5

References

No references are associated with this feature.