Pseudomonas mendocina NK-01, MDS_4441

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4441
Name
Replicon chromosome
Genomic location 4869946 - 4870611 (+ strand)

Cross-References

RefSeq YP_004382224.1
GI 330505355
Entrez 10459223
INSDC AEB60472.1
NCBI Locus Tag MDS_4441
UniParc UPI000206E2B1
UniProtKB Acc F4DN61
UniProtKB ID F4DN61_PSEMN
UniRef100 UniRef100_F4DN61
UniRef50 UniRef50_G8Q7W7
UniRef90 UniRef90_F4DN61

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter permease
Synonyms
Evidence for Translation
Charge (pH 7) 5.40
Kyte-Doolittle Hydrophobicity Value 0.849
Molecular Weight (kDa) 24.3
Isoelectric Point (pI) 9.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 446 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001275 (1254 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4441

Human Homologs

References

No references are associated with this feature.