Pseudomonas mendocina NK-01, MDS_4445

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4445
Name
Replicon chromosome
Genomic location 4874852 - 4876051 (- strand)

Cross-References

RefSeq YP_004382228.1
GI 330505359
Entrez 10459227
INSDC AEB60476.1
NCBI Locus Tag MDS_4445
UniParc UPI0000E7974F
UniProtKB Acc F4DN65
UniProtKB ID F4DN65_PSEMN
UniRef100 UniRef100_F4DN65
UniRef50 UniRef50_Q52078
UniRef90 UniRef90_P46154

Product

Feature Type CDS
Coding Frame 1
Product Name
alcohol dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -2.11
Kyte-Doolittle Hydrophobicity Value 0.027
Molecular Weight (kDa) 42.2
Isoelectric Point (pI) 6.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1KOL OXIDOREDUCTASE 12/21/01 Crystal structure of formaldehyde dehydrogenase Pseudomonas putida 1.65 X-RAY DIFFRACTION 97.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 528 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003315 (1429 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4445

Human Homologs

References

No references are associated with this feature.