Pseudomonas mendocina NK-01, MDS_4478

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4478
Name
Replicon chromosome
Genomic location 4913563 - 4914156 (+ strand)

Cross-References

RefSeq YP_004382261.1
GI 330505392
Entrez 10459260
INSDC AEB60509.1
NCBI Locus Tag MDS_4478
UniParc UPI000206E383
UniProtKB Acc F4DN98
UniProtKB ID F4DN98_PSEMN
UniRef100 UniRef100_F4DN98
UniRef50 UniRef50_P25254
UniRef90 UniRef90_A4XZY3

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.95
Kyte-Doolittle Hydrophobicity Value 1.215
Molecular Weight (kDa) 21.6
Isoelectric Point (pI) 9.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 268 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000383 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4478

Human Homologs

References

No references are associated with this feature.