Pseudomonas mendocina NK-01, MDS_4514

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4514
Name
Replicon chromosome
Genomic location 4946424 - 4946675 (+ strand)

Cross-References

RefSeq YP_004382297.1
GI 330505428
Entrez 10459296
INSDC AEB60545.1
NCBI Locus Tag MDS_4514
UniParc UPI0000E797C6
UniProtKB Acc F4DP18
UniProtKB ID F4DP18_PSEMN
UniRef100 UniRef100_F4DP18
UniRef50 UniRef50_P00208
UniRef90 UniRef90_A6UYG6

Product

Feature Type CDS
Coding Frame 1
Product Name
4Fe-4S ferredoxin
Synonyms
Evidence for Translation
Charge (pH 7) -13.04
Kyte-Doolittle Hydrophobicity Value -0.273
Molecular Weight (kDa) 9.3
Isoelectric Point (pI) 3.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2FGO ELECTRON TRANSPORT 12/22/05 Structure of the 2[4FE-4S] ferredoxin from Pseudomonas aeruginosa Pseudomonas aeruginosa 1.32 X-RAY DIFFRACTION 92.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 295 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000353 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4514
Search term: 4Fe-4S ferredoxin

Human Homologs

References

No references are associated with this feature.