Pseudomonas mendocina NK-01, MDS_4686

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4686
Name
Replicon chromosome
Genomic location 5132392 - 5133021 (- strand)

Cross-References

RefSeq YP_004382469.1
GI 330505600
Entrez 10459468
INSDC AEB60717.1
NCBI Locus Tag MDS_4686
UniParc UPI000206DB20
UniProtKB Acc F4DQW1
UniProtKB ID F4DQW1_PSEMN
UniRef100 UniRef100_F4DQW1
UniRef50 UniRef50_A0A0A6ZVP4
UniRef90 UniRef90_F4DQW1

Product

Feature Type CDS
Coding Frame 1
Product Name
isochorismatase hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) -6.37
Kyte-Doolittle Hydrophobicity Value -0.028
Molecular Weight (kDa) 23.0
Isoelectric Point (pI) 4.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 212 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001159 (872 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4686

Human Homologs

References

No references are associated with this feature.