Pseudomonas mendocina NK-01, MDS_4785

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4785
Name
Replicon chromosome
Genomic location 5239387 - 5240292 (+ strand)

Cross-References

RefSeq YP_004382568.1
GI 330505699
Entrez 10459567
INSDC AEB60816.1
NCBI Locus Tag MDS_4785
UniParc UPI000206DE0C
UniProtKB Acc F4DRU6
UniProtKB ID F4DRU6_PSEMN
UniRef100 UniRef100_F4DRU6
UniRef50 UniRef50_B4ETU8
UniRef90 UniRef90_A4Y0S1

Product

Feature Type CDS
Coding Frame 1
Product Name
auxin efflux carrier
Synonyms
Evidence for Translation
Charge (pH 7) 5.92
Kyte-Doolittle Hydrophobicity Value 1.009
Molecular Weight (kDa) 31.9
Isoelectric Point (pI) 10.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 253 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005009 (400 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4785

Human Homologs

References

No references are associated with this feature.