Pseudomonas mendocina NK-01, MDS_4839

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4839
Name
Replicon chromosome
Genomic location 5299036 - 5299806 (+ strand)

Cross-References

RefSeq YP_004382622.1
GI 330505753
Entrez 10459621
INSDC AEB60870.1
NCBI Locus Tag MDS_4839
UniParc UPI000206DF04
UniProtKB Acc F4DSP0
UniProtKB ID F4DSP0_PSEMN
UniRef100 UniRef100_F4DSP0
UniRef50 UniRef50_D3P6A1
UniRef90 UniRef90_W6R1C9

Product

Feature Type CDS
Coding Frame 1
Product Name
NlpA lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) -1.07
Kyte-Doolittle Hydrophobicity Value -0.055
Molecular Weight (kDa) 27.7
Isoelectric Point (pI) 6.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 268 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005044 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4839
Search term: NlpA lipoprotein

Human Homologs

References

No references are associated with this feature.