Pseudomonas syringae pv. tomato DC3000, PSPTO_0119

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_0119
NCBI Old Locus TagPSPTO0119
Name
Synonym: PSPTO0119
Replicon chromosome
Genomic location 142975 - 144354 (+ strand)

Cross-References

RefSeq NP_789978.1
GI 28867359
Entrez 1181727
INSDC AAO53673.1
NCBI Locus Tag PSPTO_0119
NCBI Old Locus Tag PSPTO0119
UniParc UPI0000008304
UniProtKB Acc Q88B98
UniProtKB ID Q88B98_PSESM
UniRef100 UniRef100_Q88B98
UniRef50 UniRef50_Q1IGW1
UniRef90 UniRef90_D7HTD2

Product

Feature Type CDS
Coding Frame 1
Product Name
peptidase, M16 family
Synonyms
Evidence for Translation
Charge (pH 7) -11.93
Kyte-Doolittle Hydrophobicity Value -0.299
Molecular Weight (kDa) 51.5
Isoelectric Point (pI) 5.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 410 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005016 (491 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0119

Human Homologs

References

No references are associated with this feature.