Pseudomonas syringae pv. tomato DC3000, PSPTO_0146

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0146
NCBI Old Locus Tag	PSPTO0146
Name	Synonym: PSPTO0146
Replicon	chromosome
Genomic location	169523 - 170578 (- strand)

Cross-References

RefSeq	NP_790005.1
GI	28867386
Entrez	1181754
INSDC	AAO53700.1
NCBI Locus Tag	PSPTO_0146
NCBI Old Locus Tag	PSPTO0146
UniParc	UPI000000831F
UniProtKB Acc	Q88B73
UniProtKB ID	Q88B73_PSESM
UniRef100	UniRef100_Q88B73
UniRef50	UniRef50_A4Y0T6
UniRef90	UniRef90_A0A0B8VSZ7

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	5.83
Kyte-Doolittle Hydrophobicity Value	-0.419
Molecular Weight (kDa)	40.1
Isoelectric Point (pI)	8.93

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 45 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000062 (528 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0146

Human Homologs

References