Pseudomonas syringae pv. tomato DC3000, PSPTO_0166

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_0166
NCBI Old Locus TagPSPTO0166
Name
Synonym: PSPTO0166
Replicon chromosome
Genomic location 186464 - 187390 (+ strand)

Cross-References

RefSeq NP_790025.1
GI 28867406
Entrez 1181774
INSDC AAO53720.1
NCBI Locus Tag PSPTO_0166
NCBI Old Locus Tag PSPTO0166
UniParc UPI0000008333
UniProtKB Acc Q88B53
UniProtKB ID Q88B53_PSESM
UniRef100 UniRef100_Q88B53
UniRef50 UniRef50_G8PX81
UniRef90 UniRef90_Q88B53

Product

Feature Type CDS
Coding Frame 1
Product Name
glycine/betaine family, ABC transporter, substrate-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.66
Kyte-Doolittle Hydrophobicity Value -0.037
Molecular Weight (kDa) 33.2
Isoelectric Point (pI) 7.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 133 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000030 (491 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0166

Human Homologs

References

No references are associated with this feature.