Pseudomonas syringae pv. tomato DC3000, PSPTO_0175

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0175
NCBI Old Locus Tag	PSPTO0175
Name	Synonym: PSPTO0175
Replicon	chromosome
Genomic location	196084 - 197268 (- strand)

Cross-References

RefSeq	NP_790034.1
GI	28867415
Entrez	1181783
INSDC	AAO53729.1
NCBI Locus Tag	PSPTO_0175
NCBI Old Locus Tag	PSPTO0175
UniParc	UPI000000833C
UniProtKB Acc	Q88B45
UniProtKB ID	Q88B45_PSESM
UniRef100	UniRef100_Q88B45
UniRef50	UniRef50_G8PX87
UniRef90	UniRef90_Q48QH9

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA processing protein DprA
Synonyms
Evidence for Translation
Charge (pH 7)	0.74
Kyte-Doolittle Hydrophobicity Value	0.021
Molecular Weight (kDa)	41.5
Isoelectric Point (pI)	7.14

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 573 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000021 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0175 Search term: DNA processing protein DprA

Human Homologs

References