Pseudomonas syringae pv. tomato DC3000, PSPTO_0179 (sun)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0179
NCBI Old Locus Tag	PSPTO0179
Name	sun Synonym: PSPTO0179
Replicon	chromosome
Genomic location	199982 - 201328 (+ strand)

Cross-References

RefSeq	NP_790038.1
GI	28867419
Entrez	1181787
INSDC	AAO53733.1
NCBI Locus Tag	PSPTO_0179
NCBI Old Locus Tag	PSPTO0179
UniParc	UPI0000008340
UniProtKB Acc	Q88B41
UniProtKB ID	RSMB_PSESM
UniRef100	UniRef100_Q88B41
UniRef50	UniRef50_Q88B41
UniRef90	UniRef90_Q88B41

Product

Feature Type	CDS
Coding Frame	1
Product Name	sun protein
Synonyms
Evidence for Translation
Charge (pH 7)	0.91
Kyte-Doolittle Hydrophobicity Value	-0.097
Molecular Weight (kDa)	48.5
Isoelectric Point (pI)	7.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000017 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0179 Search term: sun Search term: sun protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000382392 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 1.5e-26 Percent Identity: 34.6
Ensembl 110, assembly GRCh38.p14	ENSP00000439422 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 1.5e-26 Percent Identity: 34.6
Ensembl 110, assembly GRCh38.p14	ENSP00000371858 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 1.5e-26 Percent Identity: 34.6
Ensembl 110, assembly GRCh38.p14	ENSP00000444437 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 1.5e-26 Percent Identity: 34.6
Ensembl 110, assembly GRCh38.p14	ENSP00000313272 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 1.5e-26 Percent Identity: 34.6
Ensembl 110, assembly GRCh38.p14	ENSP00000443150 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 1.5e-26 Percent Identity: 34.6

References