Pseudomonas syringae pv. tomato DC3000, PSPTO_0182

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0182
NCBI Old Locus Tag	PSPTO0182
Name	Synonym: PSPTO0182
Replicon	chromosome
Genomic location	205278 - 206165 (- strand)

Cross-References

RefSeq	NP_790041.1
GI	28867422
Entrez	1181790
INSDC	AAO53736.1
NCBI Locus Tag	PSPTO_0182
NCBI Old Locus Tag	PSPTO0182
UniParc	UPI0000008343
UniProtKB Acc	Q88B38
UniProtKB ID	Q88B38_PSESM
UniRef100	UniRef100_Q88B38
UniRef50	UniRef50_C3KE43
UniRef90	UniRef90_Q88B38

Product

Feature Type	CDS
Coding Frame	1
Product Name	lipid A biosynthesis lauroyl acyltransferase
Synonyms
Evidence for Translation
Charge (pH 7)	15.56
Kyte-Doolittle Hydrophobicity Value	-0.059
Molecular Weight (kDa)	32.7
Isoelectric Point (pI)	10.18

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 288 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000011 (538 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0182 Search term: lipid A biosynthesis lauroyl acyltransferase

Human Homologs

References