Pseudomonas syringae pv. tomato DC3000, PSPTO_0397

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0397
NCBI Old Locus Tag	PSPTO0397
Name	Synonym: PSPTO0397
Replicon	chromosome
Genomic location	437235 - 439244 (+ strand)

Cross-References

RefSeq	NP_790246.1
GI	28867627
Entrez	1182006
INSDC	AAO53941.1
NCBI Locus Tag	PSPTO_0397
NCBI Old Locus Tag	PSPTO0397
UniParc	UPI0000008409
UniProtKB Acc	Q88AJ3
UniProtKB ID	Q88AJ3_PSESM
UniRef100	UniRef100_Q88AJ3
UniRef50	UniRef50_Q9HTG5
UniRef90	UniRef90_Q48CI4

Product

Feature Type	CDS
Coding Frame	1
Product Name	iron-sulfur cluster-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	13.40
Kyte-Doolittle Hydrophobicity Value	0.046
Molecular Weight (kDa)	72.9
Isoelectric Point (pI)	8.63

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 297 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004956 (511 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0397 Search term: iron-sulfur cluster-binding protein

Human Homologs

References