Pseudomonas syringae pv. tomato DC3000, PSPTO_0421

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_0421
NCBI Old Locus TagPSPTO0421
Name
Synonym: PSPTO0421
Replicon chromosome
Genomic location 466742 - 467755 (- strand)

Cross-References

RefSeq NP_790270.1
GI 28867651
Entrez 1182030
INSDC AAO53965.1
NCBI Locus Tag PSPTO_0421
NCBI Old Locus Tag PSPTO0421
UniParc UPI0000008421
UniProtKB Acc Q88AG9
UniProtKB ID Q88AG9_PSESM
UniRef100 UniRef100_Q88AG9
UniRef50 UniRef50_G8Q3N8
UniRef90 UniRef90_Q88AG9

Product

Feature Type CDS
Coding Frame 1
Product Name
alpha/beta fold family hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) 1.03
Kyte-Doolittle Hydrophobicity Value -0.280
Molecular Weight (kDa) 37.4
Isoelectric Point (pI) 7.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 185 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000359 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0421

Human Homologs

Ensembl 110, assembly GRCh38.p14
abhydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:17553]
E-value: 4.3e-31
Percent Identity: 27.1

References

No references are associated with this feature.