Pseudomonas syringae pv. tomato DC3000, PSPTO_0456 (purU-1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_0456
NCBI Old Locus TagPSPTO0456
Name
purU-1
Synonym: PSPTO0456
Replicon chromosome
Genomic location 499114 - 499971 (- strand)

Cross-References

RefSeq NP_790305.1
GI 28867686
Entrez 1182065
INSDC AAO54000.1
NCBI Locus Tag PSPTO_0456
NCBI Old Locus Tag PSPTO0456
UniParc UPI0000008442
UniProtKB Acc Q88AD6
UniProtKB ID Q88AD6_PSESM
UniRef100 UniRef100_Q88AD6
UniRef50 UniRef50_Q47Y32
UniRef90 UniRef90_Q4K4Q1

Product

Feature Type CDS
Coding Frame 1
Product Name
formyltetrahydrofolate deformylase
Synonyms
Evidence for Translation
Charge (pH 7) -6.99
Kyte-Doolittle Hydrophobicity Value -0.225
Molecular Weight (kDa) 32.3
Isoelectric Point (pI) 6.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3N0V HYDROLASE 05/14/10 Crystal structure of a formyltetrahydrofolate deformylase (PP_0327) from PSEUDOMONAS PUTIDA KT2440 at 2.25 A resolution Pseudomonas putida 2.25 X-RAY DIFFRACTION 90.2

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 595 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004974 (513 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0456
Search term: purU-1

Human Homologs

References

No references are associated with this feature.