Pseudomonas syringae pv. tomato DC3000, PSPTO_0547

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0547
NCBI Old Locus Tag	PSPTO0547
Name	Synonym: PSPTO0547
Replicon	chromosome
Genomic location	600744 - 602666 (- strand)

Cross-References

RefSeq	NP_790394.1
GI	28867775
Entrez	1182157
INSDC	AAO54089.1
NCBI Locus Tag	PSPTO_0547
NCBI Old Locus Tag	PSPTO0547
UniParc	UPI0000008498
UniProtKB Acc	Q88A50
UniProtKB ID	Q88A50_PSESM
UniRef100	UniRef100_Q88A50
UniRef50	UniRef50_P0ACY5
UniRef90	UniRef90_G8Q194

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-7.70
Kyte-Doolittle Hydrophobicity Value	-0.452
Molecular Weight (kDa)	73.6
Isoelectric Point (pI)	5.79

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 174 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000571 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0547

Human Homologs

References