Pseudomonas syringae pv. tomato DC3000, PSPTO_0594 (trpC)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0594
NCBI Old Locus Tag	PSPTO0594
Name	trpC Synonym: PSPTO0594
Replicon	chromosome
Genomic location	653050 - 653886 (+ strand)

Cross-References

RefSeq	NP_790441.1
GI	28867822
Entrez	1182205
INSDC	AAO54136.1
NCBI Locus Tag	PSPTO_0594
NCBI Old Locus Tag	PSPTO0594
UniParc	UPI00000084C7
UniProtKB Acc	Q88A03
UniProtKB ID	TRPC_PSESM
UniRef100	UniRef100_Q88A03
UniRef50	UniRef50_P00911
UniRef90	UniRef90_Q88A03

Product

Feature Type	CDS
Coding Frame	1
Product Name	indole-3-glycerol phosphate synthase
Synonyms
Evidence for Translation
Charge (pH 7)	-10.60
Kyte-Doolittle Hydrophobicity Value	0.062
Molecular Weight (kDa)	30.3
Isoelectric Point (pI)	4.57

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 584 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000631 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0594 Search term: trpC Search term: indole-3-glycerol phosphate synthase

Human Homologs

References