Pseudomonas syringae pv. tomato DC3000, PSPTO_0909

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_0909
NCBI Old Locus TagPSPTO0909
Name
Synonym: PSPTO0909
Replicon chromosome
Genomic location 990834 - 991340 (- strand)

Cross-References

RefSeq NP_790748.1
GI 28868129
Entrez 1182538
INSDC AAO54443.1
NCBI Locus Tag PSPTO_0909
NCBI Old Locus Tag PSPTO0909
UniParc UPI00000085EF
UniProtKB Acc Q888V7
UniProtKB ID CHED_PSESM
UniRef100 UniRef100_Q888V7
UniRef50 UniRef50_Q48ND8
UniRef90 UniRef90_Q888V7

Product

Feature Type CDS
Coding Frame 1
Product Name
chemoreceptor glutamine deamidase CheD
Synonyms
Evidence for Translation
Charge (pH 7) 5.81
Kyte-Doolittle Hydrophobicity Value -0.437
Molecular Weight (kDa) 19.2
Isoelectric Point (pI) 9.27

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 219 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017409 (53 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0909

Human Homologs

References

No references are associated with this feature.