Pseudomonas syringae pv. tomato DC3000, PSPTO_1009

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_1009
NCBI Old Locus TagPSPTO1009
Name
Synonym: PSPTO1009
Replicon chromosome
Genomic location 1102902 - 1103528 (- strand)

Cross-References

RefSeq NP_790847.1
GI 28868228
Entrez 1182643
INSDC AAO54542.1
NCBI Locus Tag PSPTO_1009
NCBI Old Locus Tag PSPTO1009
UniParc UPI0000008652
UniProtKB Acc Q888K9
UniProtKB ID Q888K9_PSESM
UniRef100 UniRef100_Q888K9
UniRef50 UniRef50_Q48N37
UniRef90 UniRef90_Q48N37

Product

Feature Type CDS
Coding Frame 1
Product Name
isochorismatase family protein
Synonyms
Evidence for Translation
Charge (pH 7) -6.83
Kyte-Doolittle Hydrophobicity Value -0.024
Molecular Weight (kDa) 23.0
Isoelectric Point (pI) 4.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 199 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001159 (872 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_1009

Human Homologs

References

No references are associated with this feature.