Pseudomonas syringae pv. tomato DC3000, PSPTO_1173

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1173
NCBI Old Locus Tag	PSPTO1173
Name	Synonym: PSPTO1173
Replicon	chromosome
Genomic location	1287676 - 1288779 (+ strand)

Cross-References

RefSeq	NP_791005.1
GI	28868386
Entrez	1182809
INSDC	AAO54700.1
NCBI Locus Tag	PSPTO_1173
NCBI Old Locus Tag	PSPTO1173
UniParc	UPI00000086E7
UniProtKB Acc	Q887W0
UniProtKB ID	Q887W0_PSESM
UniRef100	UniRef100_Q887W0
UniRef50	UniRef50_F4C9I9
UniRef90	UniRef90_Q48MP2

Product

Feature Type	CDS
Coding Frame	1
Product Name	oxidoreductase FAD/FMN-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-6.09
Kyte-Doolittle Hydrophobicity Value	-0.145
Molecular Weight (kDa)	40.1
Isoelectric Point (pI)	5.66

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 505 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000807 (472 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1173 Search term: oxidoreductase FAD/FMN-binding protein

Human Homologs

References