Pseudomonas syringae pv. tomato DC3000, PSPTO_1239 (algE)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1239
NCBI Old Locus Tag	PSPTO1239
Name	algE Synonym: PSPTO1239
Replicon	chromosome
Genomic location	1360516 - 1361997 (- strand)

Cross-References

RefSeq	NP_791069.1
GI	28868450
Entrez	1182875
INSDC	AAO54764.1
NCBI Locus Tag	PSPTO_1239
NCBI Old Locus Tag	PSPTO1239
UniParc	UPI0000008721
UniProtKB Acc	Q887Q2
UniProtKB ID	ALGE_PSESM
UniRef100	UniRef100_Q887Q2
UniRef50	UniRef50_P18895
UniRef90	UniRef90_Q887Q2

Product

Feature Type	CDS
Coding Frame	1
Product Name	alginate biosynthesis protein AlgE
Synonyms
Evidence for Translation
Charge (pH 7)	-18.84
Kyte-Doolittle Hydrophobicity Value	-0.652
Molecular Weight (kDa)	55.0
Isoelectric Point (pI)	4.67

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002122 (490 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1239 Search term: algE Search term: alginate biosynthesis protein AlgE

Human Homologs

References