Pseudomonas syringae pv. tomato DC3000, PSPTO_1301 (pgl)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_1301
NCBI Old Locus TagPSPTO1301
Name
pgl
Synonym: PSPTO1301
Replicon chromosome
Genomic location 1431107 - 1431820 (+ strand)

Cross-References

RefSeq NP_791130.1
GI 28868511
Entrez 1182937
INSDC AAO54825.1
NCBI Locus Tag PSPTO_1301
NCBI Old Locus Tag PSPTO1301
UniParc UPI000000875E
UniProtKB Acc Q887J1
UniProtKB ID Q887J1_PSESM
UniRef100 UniRef100_Q887J1
UniRef50 UniRef50_Q9X2N2
UniRef90 UniRef90_Q48MB6

Product

Feature Type CDS
Coding Frame 1
Product Name
6-phosphogluconolactonase
Synonyms
Evidence for Translation
Charge (pH 7) -9.13
Kyte-Doolittle Hydrophobicity Value 0.168
Molecular Weight (kDa) 25.0
Isoelectric Point (pI) 4.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 315 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002434 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_1301
Search term: pgl

Human Homologs

Ensembl 110, assembly GRCh38.p14
hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4795]
E-value: 3.7e-21
Percent Identity: 31.9
Ensembl 110, assembly GRCh38.p14
hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4795]
E-value: 3.7e-21
Percent Identity: 31.9

References

No references are associated with this feature.