Pseudomonas syringae pv. tomato DC3000, PSPTO_1690

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1690
NCBI Old Locus Tag	PSPTO1690
Name	Synonym: PSPTO1690
Replicon	chromosome
Genomic location	1857918 - 1858355 (- strand)

Cross-References

RefSeq	NP_791515.1
GI	28868896
Entrez	1183327
INSDC	AAO55210.1
NCBI Locus Tag	PSPTO_1690
NCBI Old Locus Tag	PSPTO1690
UniParc	UPI00000088D8
UniProtKB Acc	Q885Z1
UniProtKB ID	Q885Z1_PSESM
UniRef100	UniRef100_Q885Z1
UniRef50	UniRef50_Q885Z1
UniRef90	UniRef90_Q885Z1

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	3.52
Kyte-Doolittle Hydrophobicity Value	-0.453
Molecular Weight (kDa)	16.3
Isoelectric Point (pI)	8.23

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 2 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000892 (529 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1690

Human Homologs

References