Pseudomonas syringae pv. tomato DC3000, PSPTO_1736

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_1736
NCBI Old Locus TagPSPTO1736
Name
Synonym: PSPTO1736
Replicon chromosome
Genomic location 1902001 - 1903827 (+ strand)

Cross-References

RefSeq NP_791561.1
GI 28868942
Entrez 1183373
INSDC AAO55256.1
NCBI Locus Tag PSPTO_1736
NCBI Old Locus Tag PSPTO1736
UniParc UPI0000008906
UniProtKB Acc Q885U5
UniProtKB ID Q885U5_PSESM
UniRef100 UniRef100_Q885U5
UniRef50 UniRef50_D7I2P8
UniRef90 UniRef90_D7I2P8

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein/permease
Synonyms
Evidence for Translation
Charge (pH 7) 9.05
Kyte-Doolittle Hydrophobicity Value 0.222
Molecular Weight (kDa) 66.5
Isoelectric Point (pI) 9.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000827 (524 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_1736

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
E-value: 1.5e-50
Percent Identity: 28.5

References

No references are associated with this feature.