Pseudomonas syringae pv. tomato DC3000, PSPTO_1737

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1737
NCBI Old Locus Tag	PSPTO1737
Name	Synonym: PSPTO1737
Replicon	chromosome
Genomic location	1903951 - 1906407 (+ strand)

Cross-References

RefSeq	NP_791562.1
GI	28868943
Entrez	1183374
INSDC	AAO55257.1
NCBI Locus Tag	PSPTO_1737
NCBI Old Locus Tag	PSPTO1737
UniParc	UPI0000008907
UniProtKB Acc	Q885U4
UniProtKB ID	Q885U4_PSESM
UniRef100	UniRef100_Q885U4
UniRef50	UniRef50_D7I2P9
UniRef90	UniRef90_D7I2P9

Product

Feature Type	CDS
Coding Frame	1
Product Name	sensory box/GGDEF domain/EAL domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	-22.51
Kyte-Doolittle Hydrophobicity Value	0.020
Molecular Weight (kDa)	90.7
Isoelectric Point (pI)	5.06

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 470 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000828 (485 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1737 Search term: sensory box/GGDEF domain/EAL domain-containing protein

Human Homologs

References