Pseudomonas syringae pv. tomato DC3000, PSPTO_1744

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_1744
NCBI Old Locus TagPSPTO1744
Name
Synonym: PSPTO1744
Replicon chromosome
Genomic location 1912105 - 1913181 (+ strand)

Cross-References

RefSeq NP_791569.1
GI 28868950
Entrez 1183381
INSDC AAO55264.1
NCBI Locus Tag PSPTO_1744
NCBI Old Locus Tag PSPTO1744
UniParc UPI000000890E
UniProtKB Acc Q885T7
UniProtKB ID MTNA_PSESM
UniRef100 UniRef100_Q885T7
UniRef50 UniRef50_Q4ZQ92
UniRef90 UniRef90_Q4ZQ92

Product

Feature Type CDS
Coding Frame 1
Product Name
initiation factor 2 subunit family
Synonyms
Evidence for Translation
Charge (pH 7) -8.61
Kyte-Doolittle Hydrophobicity Value -0.027
Molecular Weight (kDa) 39.0
Isoelectric Point (pI) 5.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 358 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002446 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_1744

Human Homologs

Ensembl 110, assembly GRCh38.p14
methylthioribose-1-phosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:28469]
E-value: 1.6e-63
Percent Identity: 42.8

References

No references are associated with this feature.