Pseudomonas syringae pv. tomato DC3000, PSPTO_1826

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1826
NCBI Old Locus Tag	PSPTO1826
Name	Synonym: PSPTO1826
Replicon	chromosome
Genomic location	1994884 - 1995660 (+ strand)

Cross-References

RefSeq	NP_791650.1
GI	28869031
Entrez	1183467
INSDC	AAO55345.1
NCBI Locus Tag	PSPTO_1826
NCBI Old Locus Tag	PSPTO1826
UniParc	UPI000000895F
UniProtKB Acc	Q885K6
UniProtKB ID	Q885K6_PSESM
UniRef100	UniRef100_Q885K6
UniRef50	UniRef50_Q3KEJ9
UniRef90	UniRef90_S3N0F3

Product

Feature Type	CDS
Coding Frame	1
Product Name	arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	0.18
Kyte-Doolittle Hydrophobicity Value	-0.147
Molecular Weight (kDa)	27.9
Isoelectric Point (pI)	7.25

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 436 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000855 (503 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1826 Search term: arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein

Human Homologs

References