Pseudomonas syringae pv. tomato DC3000, PSPTO_1892

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1892
NCBI Old Locus Tag	PSPTO1892
Name	Synonym: PSPTO1892
Replicon	chromosome
Genomic location	2068346 - 2069635 (+ strand)

Cross-References

RefSeq	NP_791715.1
GI	28869096
Entrez	1183537
INSDC	AAO55410.1
NCBI Locus Tag	PSPTO_1892
NCBI Old Locus Tag	PSPTO1892
UniParc	UPI00000089A0
UniProtKB Acc	Q885E3
UniProtKB ID	Q885E3_PSESM
UniRef100	UniRef100_Q885E3
UniRef50	UniRef50_D7I2F2
UniRef90	UniRef90_D7I2F2

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	5.16
Kyte-Doolittle Hydrophobicity Value	-0.094
Molecular Weight (kDa)	45.6
Isoelectric Point (pI)	8.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 260 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000990 (499 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1892

Human Homologs

References