Pseudomonas syringae pv. tomato DC3000, PSPTO_1985

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_1985
NCBI Old Locus TagPSPTO1985
Name
Synonym: PSPTO1985
Replicon chromosome
Genomic location 2171322 - 2172209 (+ strand)

Cross-References

RefSeq NP_791808.1
GI 28869189
Entrez 1183630
INSDC AAO55503.1
NCBI Locus Tag PSPTO_1985
NCBI Old Locus Tag PSPTO1985
UniParc UPI00000089FC
UniProtKB Acc Q884V1
UniProtKB ID Q884V1_PSESM
UniRef100 UniRef100_Q884V1
UniRef50 UniRef50_Q88EW7
UniRef90 UniRef90_S3N019

Product

Feature Type CDS
Coding Frame 1
Product Name
motB protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.27
Kyte-Doolittle Hydrophobicity Value -0.273
Molecular Weight (kDa) 32.2
Isoelectric Point (pI) 6.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 404 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001376 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_1985
Search term: motB protein

Human Homologs

References

No references are associated with this feature.