Pseudomonas syringae pv. tomato DC3000, PSPTO_2343

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_2343
NCBI Old Locus TagPSPTO2343
Name
Synonym: PSPTO2343
Replicon chromosome
Genomic location 2596721 - 2597977 (- strand)

Cross-References

RefSeq NP_792160.1
GI 28869541
Entrez 1183994
INSDC AAO55855.1
NCBI Locus Tag PSPTO_2343
NCBI Old Locus Tag PSPTO2343
UniParc UPI0000008B52
UniProtKB Acc Q883L3
UniProtKB ID Q883L3_PSESM
UniRef100 UniRef100_Q883L3
UniRef50 UniRef50_Q88JX6
UniRef90 UniRef90_Q883L3

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane porin, OprD family
Synonyms
Evidence for Translation
Charge (pH 7) -2.38
Kyte-Doolittle Hydrophobicity Value -0.405
Molecular Weight (kDa) 45.9
Isoelectric Point (pI) 6.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 17 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000239 (1158 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2343

Human Homologs

References

No references are associated with this feature.