Pseudomonas syringae pv. tomato DC3000, PSPTO_2344

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2344
NCBI Old Locus Tag	PSPTO2344
Name	Synonym: PSPTO2344
Replicon	chromosome
Genomic location	2598221 - 2599087 (+ strand)

Cross-References

RefSeq	NP_792161.1
GI	28869542
Entrez	1183995
INSDC	AAO55856.1
NCBI Locus Tag	PSPTO_2344
NCBI Old Locus Tag	PSPTO2344
UniParc	UPI0000008B53
UniProtKB Acc	Q883L2
UniProtKB ID	Q883L2_PSESM
UniRef100	UniRef100_Q883L2
UniRef50	UniRef50_Q883L2
UniRef90	UniRef90_Q883L2

Product

Feature Type	CDS
Coding Frame	1
Product Name	membrane protein
Synonyms
Evidence for Translation
Charge (pH 7)	10.51
Kyte-Doolittle Hydrophobicity Value	0.925
Molecular Weight (kDa)	31.1
Isoelectric Point (pI)	10.05

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 208 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000238 (828 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2344 Search term: membrane protein

Human Homologs

References