Pseudomonas syringae pv. tomato DC3000, PSPTO_2345

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2345
NCBI Old Locus Tag	PSPTO2345
Name	Synonym: PSPTO2345
Replicon	chromosome
Genomic location	2599195 - 2600514 (- strand)

Cross-References

RefSeq	NP_792162.1
GI	28869543
Entrez	1183996
INSDC	AAO55857.1
NCBI Locus Tag	PSPTO_2345
NCBI Old Locus Tag	PSPTO2345
UniParc	UPI0000008B54
UniProtKB Acc	Q883L1
UniProtKB ID	Q883L1_PSESM
UniRef100	UniRef100_Q883L1
UniRef50	UniRef50_I7BQ59
UniRef90	UniRef90_S3MEV8

Product

Feature Type	CDS
Coding Frame	1
Product Name	transporter
Synonyms
Evidence for Translation
Charge (pH 7)	12.82
Kyte-Doolittle Hydrophobicity Value	0.647
Molecular Weight (kDa)	48.2
Isoelectric Point (pI)	9.89

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 316 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000234 (2404 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2345 Search term: transporter

Human Homologs

References