Pseudomonas syringae pv. tomato DC3000, PSPTO_2348

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_2348
NCBI Old Locus TagPSPTO2348
Name
Synonym: PSPTO2348
Replicon chromosome
Genomic location 2603819 - 2604673 (- strand)

Cross-References

RefSeq NP_792165.1
GI 28869546
Entrez 1183999
INSDC AAO55860.1
NCBI Locus Tag PSPTO_2348
NCBI Old Locus Tag PSPTO2348
UniParc UPI0000008B57
UniProtKB Acc Q883K8
UniProtKB ID Q883K8_PSESM
UniRef100 UniRef100_Q883K8
UniRef50 UniRef50_Q48JV1
UniRef90 UniRef90_Q48JV1

Product

Feature Type CDS
Coding Frame 1
Product Name
shikimate 5-dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -5.47
Kyte-Doolittle Hydrophobicity Value 0.070
Molecular Weight (kDa) 30.3
Isoelectric Point (pI) 6.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 598 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000242 (485 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2348

Human Homologs

References

No references are associated with this feature.